Stem-loop ahy-MIR160

Accession

MI0015336

Description

Arachis hypogaea ahy-MIR160 precursor miRNA

Literature search

2 open access papers mention ahy-MIR160
(4 sentences)

Sequence

aaauauucgaauuaugugucUGCCUGGCUCCCUGAAUGCCAuguaaguuaguuuguuaagaaaagauuaacaaacgucuuauaugGCAUGAAGGGAGUCACGCAGGcgauucauuuugaaacauau
.....((((((.....(((((((.(((((((((..((((((((((((...(((((((((.......)))))))))..))))))))))))..))))))))).)))))))......))))))......

Structure

-aaaua      -uuaug       C         GA            uua         ga 
      uucgaa      ugucUGC UGGCUCCCU  AUGCCAuguaag   guuuguuaa  a
      ||||||      ||||||| |||||||||  ||||||||||||   |||||||||  a
      aaguuu      gcGGACG ACUGAGGGA  UACGguauauuc   caaacaauu  a
uauaca      uacuua       C         AG            -ug         ag 

Annotation confidence Not enough data

Genome context

Unknown

Mature ahy-miR160-5p

• Accession: MIMAT0016322
• Description: Arachis hypogaea ahy-miR160-5p mature miRNA
• Sequence: 21 - UGCCUGGCUCCCUGAAUGCCA - 41
• Evidence: experimental ; Illumina [1]

Mature ahy-miR160-3p

• Accession: MIMAT0016323
• Description: Arachis hypogaea ahy-miR160-3p mature miRNA
• Sequence: 86 - GCAUGAAGGGAGUCACGCAGG - 106
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20047695
   Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)
   Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ
   BMC Plant Biol (2010) 10:3