Stem-loop ahy-MIR3509

Accession

MI0015342

Description

Arachis hypogaea ahy-MIR3509 precursor miRNA

Literature search

1 open access papers mention ahy-MIR3509
(2 sentences)

Sequence

ucgacuucacguugaaguugaAUACUUGAGAGCCGUUAGAUGAuuugauugauuugacuaaauuuucAUCUAACGACUCUCAGAUAUCAacuucacgugaagucaacuucaccugaguuuucaccuuaauacaaaaauagaauuag
..((((((((((.((((((((.((.(((((((.((((((((((...((((..........)))).)))))))))).))))))).))))))))))))))))))))(((((.....)))))...........................

Structure

----------------------------------------uc          u        A  C       C          uuu    gauu 
                                          gacuucacgu gaaguuga UA UUGAGAG CGUUAGAUGA   gauu    u
                                          |||||||||| |||||||| || ||||||| ||||||||||   ||||     
                                          cugaagugca cuucaACU AU GACUCUC GCAAUCUAcu   uuaa    g
gauuaagauaaaaacauaauuccacuuuugaguccacuucaa          -        -  A       A          --u    auca 

Annotation confidence Not enough data

Genome context

Unknown

Mature ahy-miR3509-5p

• Accession: MIMAT0016331
• Description: Arachis hypogaea ahy-miR3509-5p mature miRNA
• Sequence: 22 - AUACUUGAGAGCCGUUAGAUGA - 43
• Evidence: experimental ; Illumina [1]

Mature ahy-miR3509-3p

• Accession: MIMAT0016332
• Description: Arachis hypogaea ahy-miR3509-3p mature miRNA
• Sequence: 68 - AUCUAACGACUCUCAGAUAUCA - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20047695
   Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)
   Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ
   BMC Plant Biol (2010) 10:3