Stem-loop ahy-MIR3513

Accession

MI0015346

Description

Arachis hypogaea ahy-MIR3513 precursor miRNA

Literature search

2 open access papers mention ahy-MIR3513
(3 sentences)

Sequence

uauugucuaauuguaauggauuUUAAUUUCUGAGUUUGUCAUCugaacuucuguugauuguguucuaaauuucugauguuacauguguuguugguuugUUGAUAAGAUAGAAAUUGUAUaaauaccguugcu
............((((((((((((((((((((..(((((((.(.(((((.........((((.((.........))...)))).........)))))).))))))).)))))))))...)))).))))))).

Structure

uauugucuaauu       -    ---         AG       U u     ucuguugau    --u  uaa 
            guaaugg auuU   UAAUUUCUG  UUUGUCA C gaacu         ugug   uc   a
            ||||||| ||||   |||||||||  ||||||| | |||||         ||||   ||   u
            cguugcc uaaa   GUUAAAGAU  GAAUAGU g uuugg         acau   ag   u
-----------u       a    UAU         -A       U -     uuguugugu    ugu  ucu 

Annotation confidence Not enough data

Genome context

Unknown

Mature ahy-miR3513-5p

• Accession: MIMAT0016337
• Description: Arachis hypogaea ahy-miR3513-5p mature miRNA
• Sequence: 23 - UUAAUUUCUGAGUUUGUCAUC - 43
• Evidence: experimental ; Illumina [1]

Mature ahy-miR3513-3p

• Accession: MIMAT0016338
• Description: Arachis hypogaea ahy-miR3513-3p mature miRNA
• Sequence: 99 - UUGAUAAGAUAGAAAUUGUAU - 119
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20047695
   Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)
   Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ
   BMC Plant Biol (2010) 10:3