Stem-loop ahy-MIR3515

Accession

MI0015348

Description

Arachis hypogaea ahy-MIR3515 precursor miRNA

Literature search

2 open access papers mention ahy-MIR3515
(3 sentences)

Sequence

ggaggagaaucaauaauguuauuucuacauuucauuuucuauacucauucucugcaccuuccuuuuauguaugauaaaggaaaaaauauaaauuuuucuauuauuuugucauaaaagugagguguagaguaaaAAUGUAGAAAAUGAACGGUAUaaauaacauugauguugaga
.........(((((((((((((((.(((..(((((((((((((......(((((((((((.((((((((((.(((((.(((((((.......))))))).))))).)).)))))))).)))))))))))......)))))))))))))..))).)))))))))...))))))..

Structure

ggaggagaa      ---         c   au             cucauu           c        -  u     a       au 
         ucaaua   auguuauuu uac  uucauuuucuaua      cucugcaccuu cuuuuaug ua gauaa ggaaaaa  a
         ||||||   ||||||||| |||  |||||||||||||      ||||||||||| |||||||| || ||||| |||||||  u
         aguugu   uacaauaaa AUG  AAGUAAAAGAUGU      gagauguggag gaaaauac gu uuauu ucuuuuu  a
-------ag      agu         U   GC             AAaaau           u        u  u     a       aa 

Annotation confidence Not enough data

Genome context

Unknown

Mature ahy-miR3515

• Accession: MIMAT0016341
• Description: Arachis hypogaea ahy-miR3515 mature miRNA
• Sequence: 134 - AAUGUAGAAAAUGAACGGUAU - 154
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20047695
   Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)
   Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ
   BMC Plant Biol (2010) 10:3