Stem-loop ahy-MIR3520

Accession

MI0015353

Description

Arachis hypogaea ahy-MIR3520 precursor miRNA

Literature search

1 open access papers mention ahy-MIR3520
(1 sentences)

Sequence

gaccuggguccucuauuuauAGGUGAUGGUGAAUAUCUUAUCuuaucuuauuugguuaagauAAGGGAGACGUUUGAAUUAUCcuauggagacauuunaauucgaaaguugguua
((((...(((.....((((((((((((..(((((.((((.((((((((((......)))))))))))))).))))).)))).))))))))))).................)))).

Structure

-    --------------ugg   cucua        -    GG     A    A          uu 
 gacc                 guc     uuuauAGG UGAU  UGAAU UCUU UCuuaucuua  u
 ||||                 |||     |||||||| ||||  ||||| |||| ||||||||||   
 uugg                 cag     agguaucC AUUA  GUUUG AGAG GGAAuagaau  g
a    uugaaagcuuaanuuua   -----        U    -A     C    -          ug 

Annotation confidence Not enough data

Genome context

Unknown

Mature ahy-miR3520-5p

• Accession: MIMAT0016346
• Description: Arachis hypogaea ahy-miR3520-5p mature miRNA
• Sequence: 21 - AGGUGAUGGUGAAUAUCUUAUC - 42
• Evidence: experimental ; Illumina [1]

Mature ahy-miR3520-3p

• Accession: MIMAT0016347
• Description: Arachis hypogaea ahy-miR3520-3p mature miRNA
• Sequence: 63 - AAGGGAGACGUUUGAAUUAUC - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20047695
   Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)
   Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ
   BMC Plant Biol (2010) 10:3