Stem-loop rlcv-mir-rL1-35

Accession

MI0015356

Description

Rhesus lymphocryptovirus rlcv-mir-rL1-35 precursor miRNA

Sequence

gggcuccccgguCACCGGCUCACAGCUAGUACGGacgauuauuggcucUGUAACUUGUCGUGGGACGGGcaucgaugugcuc
((((.(..((((..(((.(((((.((.(((((((((.(....).).))))).))).)).))))).)))..))))..).))))

Structure

    u cc    CA   G     A  U   -     - g u 
gggc c  cggu  CCG CUCAC GC AGU ACGGa c a u
|||| |  ||||  ||| ||||| || ||| ||||| | |  
cucg g  gcua  GGC GGGUG UG UCA UGUcu g u a
    u ua    cG   A     C  U   A     c g u 

Annotation confidence Not enough data

Genome context

Unknown

Mature rlcv-miR-rL1-35-5p

• Accession: MIMAT0016962
• Description: Rhesus lymphocryptovirus rlcv-miR-rL1-35-5p mature miRNA
• Sequence: 13 - CACCGGCUCACAGCUAGUACGG - 34
• Evidence: experimental ; Illumina [1]

Mature rlcv-miR-rL1-35-3p

• Accession: MIMAT0016963
• Description: Rhesus lymphocryptovirus rlcv-miR-rL1-35-3p mature miRNA
• Sequence: 49 - UGUAACUUGUCGUGGGACGGG - 69
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 20219930
   Comprehensive analysis of Rhesus lymphocryptovirus microRNA expression
   "Riley KJ, Rabinowitz GS, Steitz JA"
   "J Virol (2010) 84:5148-5157


2. PubMed ID: 24257599
   Evolutionary conservation of primate lymphocryptovirus microRNA targets
   "Skalsky RL, Kang D, Linnstaedt SD, Cullen BR"
   "J Virol (2014) 88:1617-1635