Stem-loop gga-mir-3526

Accession

MI0015377

Description

Gallus gallus gga-mir-3526 precursor miRNA

Sequence

32 reads, 2 reads per million, 4 experiments

gaucucgacuuuauuuuuccucuuuguaguuauauuuuuggaguagcuguuugucuucucgcagcuuucccaauaaagcaacuccagugucagaaUUGAAGAUGAAGUUGGUGUc
(((.((((((((((((((..((((((.((((......((((...((((((..(....)..))))))...))))......)))).)))....)))...)))))))))))))).)))

Structure

   c              -cc   ----   u    auauuu    agu      uu u 
gau ucgacuuuauuuuu   ucu    uug aguu      uugg   agcugu  g c
||| ||||||||||||||   |||    ||| ||||      ||||   ||||||  |  
cUG GGUUGAAGUAGAAG   aga    gac ucaa      aacc   ucgacg  c u
   U              UUa   cugu   c    cgaaau    cuu      cu u 

Annotation confidence Not enough data

Genome context

chr3: 15593875-15593989 [+]

Mature gga-miR-3526

• Accession: MIMAT0016375
• Description: Gallus gallus gga-miR-3526 mature miRNA
• Sequence: 96 - UUGAAGAUGAAGUUGGUGU - 114
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19891781
   Identification of differentially expressed miRNAs in chicken lung and trachea with avian influenza virus infection by a deep sequencing approach
   Wang Y, Brahmakshatriya V, Zhu H, Lupiani B, Reddy SM, Yoon BJ, Gunaratne PH, Kim JH, Chen R, Wang J, Zhou H
   BMC Genomics (2009) 10:512