Stem-loop rno-mir-3085

Accession

MI0015403

Description

Rattus norvegicus rno-mir-3085 precursor miRNA

Sequence

2663 reads, 264 reads per million, 120 experiments

gucccuacucugggaaggugccauucugaaggccaggagucugaauaugagucacUCUGGCUGCUAUGGCCCCCUCccagggcuugggc
((((...((((((((.((.(((((......((((((((.((.......)).))...))))))...))))).)).))))))))...))))

Structure

    cua        a  u     ucugaa      ---  g  ug 
gucc   cucuggga gg gccau      ggccag   ga uc  a
||||   |||||||| || |||||      ||||||   || ||  a
cggg   gggaccCU CC CGGUA      UCGGUC   cu ag  u
    uuc        C  C     ---UCG      Uca  g  ua 

Annotation confidence High

Genome context

chr1: 261524235-261524323 [-]

Mature rno-miR-3085

• Accession: MIMAT0017805
• Description: Rattus norvegicus rno-miR-3085 mature miRNA
• Sequence: 56 - UCUGGCUGCUAUGGCCCCCUC - 76
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 20403161
   Small RNA expression and strain specificity in the rat
   Linsen SE, de Wit E, de Bruijn E, Cuppen E
   BMC Genomics (2010) 11:249