Stem-loop rno-mir-191b

Accession

MI0015413

Description

Rattus norvegicus rno-mir-191b precursor miRNA

Literature search

20 open access papers mention rno-mir-191b
(46 sentences)

Sequence

643 reads, 4.0 reads per million, 189 experiments

cagggcgcugcucaggcaggagagcaggGAACGAAAUCCAAGUGCAGCUGgaaugcucuggagacaacagcugcuuuugggauuccguugcccgcuguccagccauuggaggagggcucu
.(((((.((.(((.(((.(((.(((.((.((((.((((((((.(((((((.....((....))....))))))).))).))))).)))).)).))).))).)))....))).)).)))))

Structure

c     g  g   ---a   a   g   a  G    A     -   U       gaaug  c 
 agggc cu cuc    ggc gga agc gg AACG AAUCC AAG GCAGCUG     cu u
 ||||| || |||    ||| ||| ||| || |||| ||||| ||| |||||||     ||  
 ucucg ga gag    ccg ccu ucg cc uugc uuagg uuu cgucgac     ga g
-     g  g   guua   a   g   c  g    c     g   u       -aaca  g 

Annotation confidence Not enough data

Genome context

chr8: 117354348-117354467 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from rno-mir-191b

Mature rno-miR-191b-5p

• Accession: MIMAT0017817
• Description: Rattus norvegicus rno-miR-191b-5p mature miRNA
• Sequence: 29 - GAACGAAAUCCAAGUGCAGCUG - 50
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 20403161
   Small RNA expression and strain specificity in the rat
   Linsen SE, de Wit E, de Bruijn E, Cuppen E
   BMC Genomics (2010) 11:249