Stem-loop rno-mir-3564

Accession

MI0015427

Description

Rattus norvegicus rno-mir-3564 precursor miRNA

Literature search

1 open access papers mention rno-mir-3564
(1 sentences)

Sequence

2 reads, 0 reads per million, 2 experiments

guuccaaacagcuucacuauuaucugucuucuguaucccucaagcuuuccccagugaacacagcacccUGGGAAAUGCAAAGAGGGAAGacagagaggagcaugggguggga
.(((((..(((((((.......(((((((......((((((..((((((((..(((.......)))...)))))).))...)))))))))))))..))))).))...)))))

Structure

g     -aa  -     acuauua       ucugua      -aa  -      -ca   aa 
 uucca   ca gcuuc       ucugucu      ucccuc   gc uuuccc   gug  c
 |||||   || |||||       |||||||      ||||||   || ||||||   |||  a
 agggu   gu cgagg       agacaGA      AGGGAG   CG AAAGGG   cac  c
-     ggg  a     -----ag       ------      AAA  U      Ucc   ga 

Annotation confidence Not enough data

Genome context

chr19: 54632008-54632119 [+]

Mature rno-miR-3564

• Accession: MIMAT0017837
• Description: Rattus norvegicus rno-miR-3564 mature miRNA
• Sequence: 69 - UGGGAAAUGCAAAGAGGGAAG - 89
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 20403161
   Small RNA expression and strain specificity in the rat
   Linsen SE, de Wit E, de Bruijn E, Cuppen E
   BMC Genomics (2010) 11:249