Stem-loop rno-mir-344a-2

Accession

MI0015432

Description

Rattus norvegicus rno-mir-344a-2 precursor miRNA

Literature search

8 open access papers mention rno-mir-344a-2
(74 sentences)

Sequence

9284 reads, 43 reads per million, 148 experiments

gcagccaggguuuuuaccagUCAGGCUCCUGGCUAGAUUccagguaccaacugguaccugaucuagccaaagccugacuguaagcuguaaaaacaaaggaagacugc
((((((...((((((((((((((((((..(((((((((..((((((((....))))))))))))))))).))))))))))......))))))))...))....))))

Structure

    ----  agg        ------          CC         Uc        a 
gcag    cc   guuuuuac      cagUCAGGCU  UGGCUAGAU  cagguacc a
||||    ||   ||||||||      ||||||||||  |||||||||  ||||||||  
cguc    gg   caaaaaug      gucaguccga  accgaucua  guccaugg c
    agaa  aaa        ucgaau          -a         --        u 

Annotation confidence Not enough data

Genome context

chr1: 122373262-122373368 [-]

Mature rno-miR-344a-5p

• Accession: MIMAT0004654
• Description: Rattus norvegicus rno-miR-344a-5p mature miRNA
• Sequence: 21 - UCAGGCUCCUGGCUAGAUU - 39
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 20403161
   Small RNA expression and strain specificity in the rat
   Linsen SE, de Wit E, de Bruijn E, Cuppen E
   BMC Genomics (2010) 11:249