Stem-loop rno-mir-344a-2

Accession

MI0015432

Description

Rattus norvegicus rno-mir-344a-2 precursor miRNA

Literature search

8 open access papers mention rno-mir-344a-2
(73 sentences)

Sequence

39278 reads, 56.0 reads per million, 218 experiments

gcagccaggguuuuuaccagUCAGGCUCCUGGCUAGAUUCCAgguaccaacugguaccUGAUCUAGCCAAAGCCUGACUGUAagcuguaaaaacaaaggaagacugc
((((((...((((((((((((((((((..(((((((((..((((((((....))))))))))))))))).))))))))))......))))))))...))....))))

Structure

    ----  agg        ------          CC         UC        a 
gcag    cc   guuuuuac      cagUCAGGCU  UGGCUAGAU  CAgguacc a
||||    ||   ||||||||      ||||||||||  |||||||||  ||||||||  
cguc    gg   caaaaaug      GUCAGUCCGA  ACCGAUCUA  GUccaugg c
    agaa  aaa        ucgaAU          -A         --        u 

Annotation confidence Medium

Genome context

chr1: 122373262-122373368 [-]

Mature rno-miR-344a-2-5p

• Accession: MIMAT0004654
• Description: Rattus norvegicus rno-miR-344a-2-5p mature miRNA
• Sequence: 21 - UCAGGCUCCUGGCUAGAUUCCA - 42
• Evidence: experimental ; SOLiD [1]

Mature rno-miR-344a-2-3p

• Accession: MIMAT0052030
• Description: Rattus norvegicus rno-miR-344a-2-3p mature miRNA
• Sequence: 59 - UGAUCUAGCCAAAGCCUGACUGUA - 82
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 20403161
   Small RNA expression and strain specificity in the rat
   Linsen SE, de Wit E, de Bruijn E, Cuppen E
   BMC Genomics (2010) 11:249