Stem-loop rno-mir-3569

Accession

MI0015437

Description

Rattus norvegicus rno-mir-3569 precursor miRNA

Literature search

1 open access papers mention rno-mir-3569
(1 sentences)

Sequence

64 reads, 5 reads per million, 46 experiments

cagucccuuccucGGAGGACAGCAGACUCAGGUCgaaaucgggaccugagucugcgcuccucuccagcccuagacu
.((((.....((.((((((..(((((((((((((........)))))))))))))..))))))..)).....))))

Structure

c    ccuuc  -c      CA             gaa 
 aguc     cu  GGAGGA  GCAGACUCAGGUC   a
 ||||     ||  ||||||  |||||||||||||    
 ucag     ga  ucuccu  cgucugaguccag   u
-    auccc  cc      cg             ggc 

Annotation confidence Not enough data

Genome context

chr1: 89042806-89042881 [+]

Mature rno-miR-3569

• Accession: MIMAT0017849
• Description: Rattus norvegicus rno-miR-3569 mature miRNA
• Sequence: 14 - GGAGGACAGCAGACUCAGGUC - 34
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 20403161
   Small RNA expression and strain specificity in the rat
   Linsen SE, de Wit E, de Bruijn E, Cuppen E
   BMC Genomics (2010) 11:249