Stem-loop rno-mir-2985

Accession

MI0015469

Description

Rattus norvegicus rno-mir-2985 precursor miRNA

Literature search

1 open access papers mention rno-mir-2985
(1 sentences)

Sequence

848 reads, 3.0 reads per million, 85 experiments

aucgccacaccuaaaggauccucauuaagGUGGGUGGAAUAGUAUAACAaugugcucaauguUGUUAUAGUAUCCCACCUACCCugaugugucuuuaagacucuaacggu
..........((.((((((...(((((.(((((((((.(((.(((((((((((.....))))))))))).))).))))))))).))))).)))))).))...........

Structure

-aucgccacac  a      ccu     a         A   G           g 
           cu aaggau   cauua gGUGGGUGG AUA UAUAACAaugu c
           || ||||||   ||||| ||||||||| ||| ||||||||||| u
           ga uuucug   guagu CCAUCCACC UAU AUAUUGUugua c
uggcaaucuca  a      --u     C         C   G           a 

Annotation confidence High

Genome context

chr2: 179591312-179591421 [-]

Mature rno-miR-2985-5p

• Accession: MIMAT0052033
• Description: Rattus norvegicus rno-miR-2985-5p mature miRNA
• Sequence: 30 - GUGGGUGGAAUAGUAUAACA - 49
• Evidence: experimental ; SOLiD [1]

Mature rno-miR-2985-3p

• Accession: MIMAT0017891
• Description: Rattus norvegicus rno-miR-2985-3p mature miRNA
• Sequence: 63 - UGUUAUAGUAUCCCACCUACCC - 84
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 20403161
   Small RNA expression and strain specificity in the rat
   Linsen SE, de Wit E, de Bruijn E, Cuppen E
   BMC Genomics (2010) 11:249