Accession
MI0015505
Description
Ciona intestinalis
cin-mir-4000f precursor miRNA
Sequence
1238
reads,
461
reads per million, 2 experiments
UGAAACUUCGCUGGAACAGGccgggugacccGAGCUGUUCACGAAGUUUUA
((((((((((...((((((..((((...))))..)))))).))))))))))
((((((((((...((((((..((((...))))..)))))).))))))))))
Structure
CUG Gc u
UGAAACUUCG GAACAG cggg
|||||||||| |||||| |||| g
AUUUUGAAGC CUUGUC Gccc
--A GA a
Annotation confidence
High
Do you think this miRNA is real?
Genome context
3p: 1538921-1538971 [+]
Clustered miRNAs
12 other miRNAs are < 10 kb from cin-mir-4000f
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cin-miR-4000f-5p
| Accession | MIMAT0016436 |
| Description | Ciona intestinalis cin-miR-4000f-5p mature miRNA |
| Sequence | 1 - UGAAACUUCGCUGGAACAGG - 20 |
| Evidence |
experimental
Illumina [1] |
Mature cin-miR-4000f-3p
| Accession | MIMAT0016437 |
| Description | Ciona intestinalis cin-miR-4000f-3p mature miRNA |
| Sequence | 32 - GAGCUGUUCACGAAGUUUUA - 51 |
| Evidence |
experimental
Illumina [1] |
References
|
