Accession
MI0015510
Description
Ciona intestinalis
cin-mir-4001a-1 precursor miRNA
Sequence
17708
reads,
2369.0
reads per million, 5 experiments
UGGAACUUAUACGAACAGGCUGCUuuguacucgGUCACUUCGCUUAAGUUUA
..(((((((..((((..(((((.........)))))..))))..))))))).
..(((((((..((((..(((((.........)))))..))))..))))))).
Structure
UG UA CA CUu GAACUUA CGAA GGCUG u ||||||| |||| ||||| g UUUGAAU GCUU CUGgc u -A UC CA uca
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
ref|NC_020172.1|: 4155319-4155370 [+]
Clustered miRNAs
24 other miRNAs are < 10 kb from cin-mir-4001a-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cin-miR-4001a-5p
| Accession | MIMAT0016444 |
| Description | Ciona intestinalis cin-miR-4001a-5p mature miRNA |
| Sequence | 1 - UGGAACUUAUACGAACAGGCUGCU - 24 |
| Evidence |
experimental
Illumina [1] |
Mature cin-miR-4001a-1-3p
| Accession | MIMAT0016445 |
| Description | Ciona intestinalis cin-miR-4001a-1-3p mature miRNA |
| Sequence | 34 - GUCACUUCGCUUAAGUUUA - 52 |
| Evidence |
experimental
Illumina [1] |
References
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