Accession
MI0015513
Description
Ciona intestinalis
cin-mir-4001a-2 precursor miRNA
Sequence
9944
reads,
803.0
reads per million, 9 experiments
UGGAACUUAUACGAACAGGCUGugcuguucAGCCAAUUCGUACAAGUUCAA
..((((((.((((((..(((((.......)))))..)))))).))))))..
..((((((.((((((..(((((.......)))))..)))))).))))))..
Structure
UG A CA ug GAACUU UACGAA GGCUG c |||||| |||||| ||||| u CUUGAA AUGCUU CCGAc g AA C AA uu
Annotation confidence
High
Do you think this miRNA is real?
Genome context
ref|NC_020172.1|: 4155713-4155763 [+]
Clustered miRNAs
24 other miRNAs are < 10 kb from cin-mir-4001a-2
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cin-miR-4001a-5p
| Accession | MIMAT0016444 |
| Description | Ciona intestinalis cin-miR-4001a-5p mature miRNA |
| Sequence | 1 - UGGAACUUAUACGAACAGGCUG - 22 |
| Evidence |
experimental
Illumina [1] |
Mature cin-miR-4001a-2-3p
| Accession | MIMAT0016974 |
| Description | Ciona intestinalis cin-miR-4001a-2-3p mature miRNA |
| Sequence | 31 - AGCCAAUUCGUACAAGUUCAA - 51 |
| Evidence |
experimental
Illumina [1] |
References
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