Accession
MI0015516
Description
Ciona intestinalis
cin-mir-4001e precursor miRNA
Sequence
10557
reads,
2243.0
reads per million, 3 experiments
UGGAACUUAUUUUGAACAGGCUGUauaaaacAGCUGAUCAUAUAAGUUU
..((((((((..(((.(((.((((.....))))))).))).))))))))
..((((((((..(((.(((.((((.....))))))).))).))))))))
Structure
UG UU A G a GAACUUAU UGA CAG CUGU u |||||||| ||| ||| |||| a UUUGAAUA ACU GUC GAca a -- -U A - a
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
ref|NC_020172.1|: 4153878-4153926 [+]
Clustered miRNAs
24 other miRNAs are < 10 kb from cin-mir-4001e
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cin-miR-4001e-5p
| Accession | MIMAT0016454 |
| Description | Ciona intestinalis cin-miR-4001e-5p mature miRNA |
| Sequence | 1 - UGGAACUUAUUUUGAACAGGCUGU - 24 |
| Evidence |
experimental
Illumina [1] |
Mature cin-miR-4001e-3p
| Accession | MIMAT0016455 |
| Description | Ciona intestinalis cin-miR-4001e-3p mature miRNA |
| Sequence | 32 - AGCUGAUCAUAUAAGUUU - 49 |
| Evidence |
experimental
Illumina [1] |
References
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