Accession
MI0015789
Description
Arabidopsis lyrata
aly-MIR4228 precursor miRNA
Sequence
1030
reads,
275.0
reads per million, 12 experiments
cggcguguuguuuuaaccuaAAAGCCUUGAACGCUGUCGUUucgccgucgacaacaaucacacgcgcacacuuccaccauuaucaucuauccaccacacagguucgucggaugcgaaacggugguguucagggcuuuuUUAAGGUUGCUGGAUUUUAUu
(((((..........((((((((((((((((((((((((((((((..((((((((..............................................))).)))))..))))))))))))))))))))))))))...))))))))).........
(((((..........((((((((((((((((((((((((((((((..((((((((..............................................))).)))))..))))))))))))))))))))))))))...))))))))).........
Structure
--------- uguuguuuua --- cg - aaucacacgcgcacacuuccac
cggcg accu aAAAGCCUUGAACGCUGUCGUUucgc ucgac aac c
||||| |||| |||||||||||||||||||||||||| ||||| |||
GUCGU UGGA uuuucgggacuugugguggcaaagcg ggcug uug a
uUAUUUUAG ---------- AUU ua c gacacaccaccuaucuacuauu
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
GL348714.1: 17393793-17393951 [+]
Database links
Mature aly-miR4228-5p
| Accession | MIMAT0017916 |
| Description | Arabidopsis lyrata aly-miR4228-5p mature miRNA |
| Sequence | 21 - AAAGCCUUGAACGCUGUCGUU - 41 |
| Evidence |
experimental
SOLiD [1] |
Mature aly-miR4228-3p
| Accession | MIMAT0057396 |
| Description | Arabidopsis lyrata aly-miR4228-3p mature miRNA |
| Sequence | 139 - UUAAGGUUGCUGGAUUUUAU - 158 |
| Evidence |
experimental
unknown |
References
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