Accession
MI0015957
Description
Caenorhabditis briggsae
cbr-mir-232-2 precursor miRNA
Sequence
1439
reads,
158.0
reads per million, 3 experiments
auucaagauuucggaucUCCGUAGUUUUGACCAUUUUAUCcaaccuaauaaugugaUAAAUGCAUCUUAACUGCGGUGAucuggauuuugugaac
.(((((((.((((((((.((((((((..((....((((((((.........)).))))))....))..)))))))).)))))))).))).)))).
.(((((((.((((((((.((((((((..((....((((((((.........)).))))))....))..)))))))).)))))))).))).)))).
Structure
a - u U UU CCAU - acc uuca aga uucggauc CCGUAGUU GA UUUAUC ca u |||| ||| |||||||| |||||||| || |||||| || a aagu uuu aggucuAG GGCGUCAA CU AAAUag gu a c g u U UU ACGU u aau
Annotation confidence
High
Do you think this miRNA is real?
Comments
This miRNA sequence is predicted based on homology to a verified miRNA from C. elegans [1]. The expression of this miRNA has not been verified in C. briggsae. The hairpin precursor sequence represented here matches two positions on FPC contig 143 in the C. briggsae genome sequence.
Genome context
chrIV: 8370504-8370598 [-]
Database links
Mature cbr-miR-232-5p
| Accession | MIMAT0053543 |
| Description | Caenorhabditis briggsae cbr-miR-232-5p mature miRNA |
| Sequence | 18 - UCCGUAGUUUUGACCAUUUUAUC - 40 |
| Evidence | not_experimental |
Mature cbr-miR-232-3p
| Accession | MIMAT0000497 |
| Description | Caenorhabditis briggsae cbr-miR-232-3p mature miRNA |
| Sequence | 57 - UAAAUGCAUCUUAACUGCGGUGA - 79 |
| Evidence | not_experimental |
References
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