Stem-loop nve-mir-2032b-2

Accession

MI0015987

Description

Nematostella vectensis nve-mir-2032b-2 precursor miRNA

Sequence

668 reads, 480 reads per million, 17 experiments

gcgagcucaccguugcugUCGCUGCAACAGUUAGCUAGcauuuauugcgAGGUAACUGUUGCAGCAUCCaugacugugagg
.....(((((.((((..(..(((((((((((((.((.(((.....))).)).)))))))))))))..)..)))).))))).

Structure

gcgag     c    cu UC             G  A   u 
     cucac guug  g  GCUGCAACAGUUA CU Gca u
     ||||| ||||  |  ||||||||||||| || ||| u
     gagug cagu  C  CGACGUUGUCAAU GA cgu a
----g     u    aC UA             G  g   u 

Annotation confidence Medium

Genome context

scaffold_161: 447162-447242 [-]

Mature nve-miR-2032b-5p

• Accession: MIMAT0009786
• Description: Nematostella vectensis nve-miR-2032b-5p mature miRNA
• Sequence: 19 - UCGCUGCAACAGUUAGCUAG - 38
• Evidence: experimental ; 454 [1], Illumina [2]

Mature nve-miR-2032b-3p

• Accession: MIMAT0009787
• Description: Nematostella vectensis nve-miR-2032b-3p mature miRNA
• Sequence: 50 - AGGUAACUGUUGCAGCAUCC - 69
• Evidence: experimental ; 454 [1], Illumina [2]

References

1. PubMed ID: 18830242
   Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals
   "Grimson A, Srivastava M, Fahey B, Woodcroft BJ, Chiang HR, King N, Degnan BM, Rokhsar DS, Bartel DP"
   "Nature (2008) 455:1193-1197


2. PubMed ID: 24642861
   Cnidarian microRNAs frequently regulate targets by cleavage
   "Moran Y, Fredman D, Praher D, Li XZ, Wee LM, Rentzsch F, Zamore PD, Technau U, Seitz H"
   "Genome Res (2014) 24:651-663