Stem-loop nve-mir-2024a-2

Accession

MI0015990

Description

Nematostella vectensis nve-mir-2024a-2 precursor miRNA

Sequence

118166 reads, 62776 reads per million, 23 experiments

ugcuucAAAAUAUCGGUGUUGGGUAAAAggucacauuUUACACAGUACCGAUAUUGUGAagca
(((((((.(((((((((((((.((((((.......)))))).))))))))))))).)))))))

Structure

       A             G      gg 
ugcuucA AAUAUCGGUGUUG GUAAAA  u
||||||| ||||||||||||| ||||||  c
acgaAGU UUAUAGCCAUGAC CAUUuu  a
       G             A      ac 

Annotation confidence Medium

Genome context

scaffold_126: 87172-87234 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from nve-mir-2024a-2

Mature nve-miR-2024a-5p

• Accession: MIMAT0009757
• Description: Nematostella vectensis nve-miR-2024a-5p mature miRNA
• Sequence: 7 - AAAAUAUCGGUGUUGGGUAAAA - 28
• Evidence: experimental ; 454 [1], Illumina [2]

Mature nve-miR-2024a-3p

• Accession: MIMAT0009758
• Description: Nematostella vectensis nve-miR-2024a-3p mature miRNA
• Sequence: 38 - UUACACAGUACCGAUAUUGUGA - 59
• Evidence: experimental ; 454 [1], Illumina [2]

References

1. PubMed ID: 18830242
   Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals
   "Grimson A, Srivastava M, Fahey B, Woodcroft BJ, Chiang HR, King N, Degnan BM, Rokhsar DS, Bartel DP"
   "Nature (2008) 455:1193-1197


2. PubMed ID: 24642861
   Cnidarian microRNAs frequently regulate targets by cleavage
   "Moran Y, Fredman D, Praher D, Li XZ, Wee LM, Rentzsch F, Zamore PD, Technau U, Seitz H"
   "Genome Res (2014) 24:651-663