miRBase entry: bfl-mir-135b-2

Stem-loop bfl-mir-135b-2


Accession
MI0015994
Description
Branchiostoma floridae bfl-mir-135b-2 precursor miRNA


Sequence


ccguguccAAUGGCUUUCAUCCUUUGUGAaugucugagcacaguucacacugauggggguuauuggacaaga
...((((((((((((((((((...(((((((((......))).))))))..))))))))))))))))))...

Structure
ccg                  CUU      -   cu 
   uguccAAUGGCUUUCAUC   UGUGAa ugu  g
   ||||||||||||||||||   |||||| |||   
   acagguuauuggggguag   acacuu aca  a
aga                  -uc      g   cg 


Annotation confidence Not enough data
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Genome context
ref|NC_049983.1|: 13598250-13598321 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from bfl-mir-135b-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bfl-miR-135b-5p

Accession MIMAT0010194
Description Branchiostoma floridae bfl-miR-135b-5p mature miRNA
Sequence 9 - AAUGGCUUUCAUCCUUUGUGA - 29
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68