miRBase entry: bfl-mir-135b-2

Stem-loop bfl-mir-135b-2

Accession

MI0015994

Description

Branchiostoma floridae bfl-mir-135b-2 precursor miRNA

Sequence

ccguguccAAUGGCUUUCAUCCUUUGUGAaugucugagcacaguucacacugauggggguuauuggacaaga
...((((((((((((((((((...(((((((((......))).))))))..))))))))))))))))))...

Structure

ccg                  CUU      -   cu 
   uguccAAUGGCUUUCAUC   UGUGAa ugu  g
   ||||||||||||||||||   |||||| |||   
   acagguuauuggggguag   acacuu aca  a
aga                  -uc      g   cg

Annotation confidence Not enough data

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Genome context

GG666574.1: 3848991-3849062 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from bfl-mir-135b-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature bfl-miR-135b

Accession	MIMAT0010194
Description	Branchiostoma floridae bfl-miR-135b mature miRNA
Sequence	9 - AAUGGCUUUCAUCCUUUGUGA - 29
Evidence	experimental 454 [1]

References

PubMed ID: 19196333
The deep evolution of metazoan microRNAs
"Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
"Evol Dev (2009) 11:50-68