Stem-loop hsa-mir-3620

Accession

MI0016011

Symbol

HGNC: MIR3620

Description

Homo sapiens hsa-mir-3620 precursor miRNA

Literature search

14 open access papers mention hsa-mir-3620
(18 sentences)

Sequence

2253 reads, 18.0 reads per million, 160 experiments

GUGGGCUGGGCUGGGCUGGGCcaagguacaaggccUCACCCUGCAUCCCGCACCCAG
(((((....((.(((..(((((.........)))))..))).))..)))))......

Structure

------     CUGG  U   CU     aag 
      GUGGG    GC GGG  GGGCc   g
      |||||    || |||  |||||   u
      CGCCC    CG CCC  Uccgg   a
GACCCA     --UA  U   AC     aac 

Annotation confidence Medium

Genome context

chr1: 228097263-228097341 [+]

Mature hsa-miR-3620-5p

• Accession: MIMAT0022967
• Description: Homo sapiens hsa-miR-3620-5p mature miRNA
• Sequence: 1 - GUGGGCUGGGCUGGGCUGGGC - 21
• Evidence: not_experimental

Mature hsa-miR-3620-3p

• Accession: MIMAT0018001
• Description: Homo sapiens hsa-miR-3620-3p mature miRNA
• Sequence: 36 - UCACCCUGCAUCCCGCACCCAG - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20459774
   Ultra-high throughput sequencing-based small RNA discovery and discrete statistical biomarker analysis in a collection of cervical tumours and matched controls
   Witten D, Tibshirani R, Gu SG, Fire A, Lui WO
   BMC Biol (2010) 8:58