Stem-loop hsa-mir-3622b

Accession

MI0016014

Symbol

HGNC: MIR3622B

Description

Homo sapiens hsa-mir-3622b precursor miRNA

Literature search

8 open access papers mention hsa-mir-3622b
(70 sentences)

Sequence

255 reads, 13 reads per million, 48 experiments

agugauauaauagagggugcacAGGCAUGGGAGGUCAGGUGAgcucagcucccugccUCACCUGAGCUCCCGUGCCUGugcacccucuauuggcu
.......((((((((((((((((((((((((((.(((((((((..(((....))).))))))))).))))))))))))))))))))))))))...

Structure

agugaua                          G         cu   c 
       uaauagagggugcacAGGCAUGGGAG UCAGGUGAg  cag u
       |||||||||||||||||||||||||| |||||||||  |||  
       guuaucucccacguGUCCGUGCCCUC AGUCCACUc  guc c
----ucg                          G         -c   c 

Annotation confidence Not enough data

Genome context

chr8: 27701673-27701767 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from hsa-mir-3622b

Mature hsa-miR-3622b-5p

• Accession: MIMAT0018005
• Description: Homo sapiens hsa-miR-3622b-5p mature miRNA
• Sequence: 23 - AGGCAUGGGAGGUCAGGUGA - 42
• Evidence: experimental ; Illumina [1]

Mature hsa-miR-3622b-3p

• Accession: MIMAT0018006
• Description: Homo sapiens hsa-miR-3622b-3p mature miRNA
• Sequence: 58 - UCACCUGAGCUCCCGUGCCUG - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20459774
   Ultra-high throughput sequencing-based small RNA discovery and discrete statistical biomarker analysis in a collection of cervical tumours and matched controls
   Witten D, Tibshirani R, Gu SG, Fire A, Lui WO
   BMC Biol (2010) 8:58