miRBase entry: dme-mir-3643

Stem-loop dme-mir-3643


Accession
MI0016043
Description
Drosophila melanogaster dme-mir-3643 precursor miRNA


Sequence

8 reads, 27 reads per million, 4 experiments
GUGAGUUUAUCUAAAUAUGCCCauuuaucaauagUCAUACUUAUUUAUGCUCCUUUaacuccuugcag
..((((.((..(((.((((.(.(((....))).).)))).)))..)).))))................

Structure
--------------GU    U  UC   A    C C   u 
                GAGU UA  UAA UAUG C auu a
                |||| ||  ||| |||| | |||  
                CUCG AU  AUU AUAC g uaa u
gacguuccucaaUUUC    U  UU   C    U a   c 


Annotation confidence Not enough data
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Genome context
chr2R: 17766393-17766460 [-]

Database links

Mature dme-miR-3643-5p

Accession MIMAT0018059
Description Drosophila melanogaster dme-miR-3643-5p mature miRNA
Sequence 1 - GUGAGUUUAUCUAAAUAUGCCC - 22
Evidence experimental
Illumina [1]

Mature dme-miR-3643-3p

Accession MIMAT0018060
Description Drosophila melanogaster dme-miR-3643-3p mature miRNA
Sequence 35 - UCAUACUUAUUUAUGCUCCUUU - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20620959
    MicroRNA biogenesis via splicing and exosome-mediated trimming in Drosophila
    "Flynt AS, Greimann JC, Chung WJ, Lima CD, Lai EC"
    "Mol Cell (2010) 38:900-907