Stem-loop ame-mir-3746

Accession

MI0016144

Description

Apis mellifera ame-mir-3746 precursor miRNA

Sequence

cuuucggaucuucuucucugacaaguuuacaguacaauauuuucuuuguuuuuuuuucuuuuuaugaggcacaaagcgagaagaaaCGCGGAGAGGAAGGUAUGCGUgucgagagaacagaugccucgaaaa
.((((((((((..((((((((((.((.....((((....(((((((((((((((((((.((((.((...)).)))).))))))))).))))))))))..)))))).)))).)))))).))))...)))))).

Structure

c      ---    uc      -    a  uuaca    aaua          -         u    a  a 
 uuucgg   aucu  uucucu gaca gu     guac    uuuucuuugu uuuuuuuuc uuuu ug  
 ||||||   ||||  |||||| |||| ||     ||||    |||||||||| ||||||||| |||| || g
 aaagcu   uaga  aagaga cugU CG     UAUG    AGGAGAGGCG aaagaagag gaaa ac  
a      ccg    -c      g    G  -----    --GA          C         c    c  g 

Annotation confidence Not enough data

Genome context

CM000061.5: 9890594-9890725 [+]

Mature ame-miR-3746-3p

• Accession: MIMAT0018514
• Description: Apis mellifera ame-miR-3746-3p mature miRNA
• Sequence: 87 - CGCGGAGAGGAAGGUAUGCGU - 107
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20807255
   Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
   "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
   "Insect Mol Biol (2010) 19:799-805