Stem-loop ame-mir-3747a

Accession

MI0016145

Description

Apis mellifera ame-mir-3747a precursor miRNA mir-3747

Gene
family

RF03640; mir-3747

Sequence

490 reads, 7.0 reads per million, 24 experiments

ggccUGCGAGGCUUUUUUUCAGCGAUGAauaaaaauauuguucAUCGUUGGAAAAAAGUCUUGGAga
...((.((((((((((((((((((((((((((.....)))))))))))))))))))))))))).)).

Structure

ggc  G                          a 
   cU CGAGGCUUUUUUUCAGCGAUGAauaa a
   || |||||||||||||||||||||||||| a
   gA GUUCUGAAAAAAGGUUGCUAcuuguu u
--a  G                          a 

Annotation confidence High

Genome context

CM000061.5: 13107663-13107729 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ame-mir-3747a

Mature ame-miR-3747a-5p

• Accession: MIMAT0018515
• Description: Apis mellifera ame-miR-3747a-5p mature miRNA
• Sequence: 5 - UGCGAGGCUUUUUUUCAGCGAUGA - 28
• Evidence: experimental ; SOLID [1]

Mature ame-miR-3747a-3p

• Accession: MIMAT0053084
• Description: Apis mellifera ame-miR-3747a-3p mature miRNA
• Sequence: 44 - AUCGUUGGAAAAAAGUCUUGGA - 65
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20807255
   Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
   "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
   "Insect Mol Biol (2010) 19:799-805