Stem-loop ame-mir-3747b

Accession

MI0016146

Description

Apis mellifera ame-mir-3747b precursor miRNA mir-3747

Gene
family

RF03640; mir-3747

Sequence

2053 reads, 26.0 reads per million, 24 experiments

uacccagugccaguucugCGAGAUUUCUUUUCAGUCGUGAAuaaaaauauuauUCACUGCUGGAAAAAAAUCUCGcggaaaaaauacacgaucugauuggu
...(((((..((((((((((((((((.((((((((.((((((((.....)))))))).)))))))).)))))))))))))............)))))))).

Structure

uac     gc   ------------             C        C        a 
   ccagu  cag            uucugCGAGAUUU UUUUCAGU GUGAAuaa a
   |||||  |||            ||||||||||||| |||||||| |||||||| a
   gguua  guc            aaggcGCUCUAAA AAAGGUCG CACUuauu u
--u     --   uagcacauaaaa             A        U        a 

Annotation confidence Medium

Genome context

CM000061.5: 13108273-13108373 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ame-mir-3747b

Mature ame-miR-3747b-5p

• Accession: MIMAT0018516
• Description: Apis mellifera ame-miR-3747b-5p mature miRNA
• Sequence: 19 - CGAGAUUUCUUUUCAGUCGUGAA - 41
• Evidence: experimental ; SOLID [1]

Mature ame-miR-3747b-3p

• Accession: MIMAT0053085
• Description: Apis mellifera ame-miR-3747b-3p mature miRNA
• Sequence: 54 - UCACUGCUGGAAAAAAAUCUCG - 75
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20807255
   Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
   "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
   "Insect Mol Biol (2010) 19:799-805