miRBase entry: ame-mir-3748

Stem-loop ame-mir-3748


Accession
MI0016147
Description
Apis mellifera ame-mir-3748 precursor miRNA


Sequence

gucgguuacuuugugcggggagaauaauuuuacacagauggaacgugucgauagcaguccucguuaggCGUCCGUUUCAAAGUAAAACUUgcaauuuccaaauuaaaagccuccc
...((...((((......(((((.(((((((((.....(((((((.(.((.((((.......))))..)).))))))))..)))))).)))...)))))......))))...)).

Structure
guc  uua    gugcgg     --a   -      acaga       u u  -a    ag 
   gg   cuuu      ggaga   uaa uuuuac     uggaacg g cg  uagc  u
   ||   ||||      |||||   ||| ||||||     ||||||| | ||  ||||  c
   cc   gaaa      ccuuu   gUU AAAAUG     ACUUUGC C GC  auug  c
--c  ucc    auuaaa     aac   C      ---AA       - U  gg    cu 


Annotation confidence Not enough data
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Genome context
CM000062.5: 1888686-1888800 [-]

Database links

Mature ame-miR-3748-3p

Accession MIMAT0018517
Description Apis mellifera ame-miR-3748-3p mature miRNA
Sequence 69 - CGUCCGUUUCAAAGUAAAACUU - 90
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805