Stem-loop ame-mir-3756

Accession

MI0016157

Description

Apis mellifera ame-mir-3756 precursor miRNA

Sequence

7024 reads, 74.0 reads per million, 24 experiments

aagcauacaaaugucauCUGAUUUCUUUCAUAAGGAGGAuuucaaaaauaauauugcaauauuguuuuuuacaauauugcaaaaaauuuuugaaauuCUUCUUAUGAUAGAAAUCAGCUuuaucauuuguaugcuc
.((((((((((((....(((((((((.((((((((((((((((((((((....((((((((((((.....))))))))))))...)))))))))))))))))))))).)))))))))......)))))))))))).

Structure

a            --ucau         U                      aaua            u 
 agcauacaaaug      CUGAUUUCU UCAUAAGGAGGAuuucaaaaau    uugcaauauugu u
 ||||||||||||      ||||||||| ||||||||||||||||||||||    |||||||||||| u
 ucguauguuuac      GACUAAAGA AGUAUUCUUCuuaaaguuuuua    aacguuauaaca u
c            uauuUC         U                      -aaa            u 

Annotation confidence High

Genome context

CM000065.5: 108960-109095 [-]

Mature ame-miR-3756-5p

• Accession: MIMAT0018527
• Description: Apis mellifera ame-miR-3756-5p mature miRNA
• Sequence: 18 - CUGAUUUCUUUCAUAAGGAGGA - 39
• Evidence: experimental ; SOLID [1], Illumina [2]

Mature ame-miR-3756-3p

• Accession: MIMAT0053087
• Description: Apis mellifera ame-miR-3756-3p mature miRNA
• Sequence: 98 - CUUCUUAUGAUAGAAAUCAGCU - 119
• Evidence: experimental ; SOLID [1], Illumina [2]

References

1. PubMed ID: 20807255
   Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
   "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
   "Insect Mol Biol (2010) 19:799-805


2. PubMed ID: 26853694
   MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
   "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
   "Insect Mol Biol (2016) 25:216-226