miRBase entry: ame-mir-3759

Dead hairpin entry

Stem-loop ame-mir-3759


Accession
MI0016162
Description
Apis mellifera ame-mir-3759 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus do not support its annotation as a microRNA.

Literature search
2 open access papers mention ame-mir-3759
(3 sentences)

Sequence

94237 reads, 2493.0 reads per million, 24 experiments
ggcuacucggaggcuAGUUAUGACGGAGGGUCUgagagcggggguuCCUGUUGGUGCGGGACUCACGUcgacuggguguccgcgcuaagcuc
((((.(.((((.(((((((..((((..((((((...((((((....))))))......)))))).)))))))).))).)))).)...)))).

Structure
-    --a u    g   -    AU    GA      ---gag      g 
 ggcu   c cgga gcu AGUU  GACG  GGGUCU      agcggg g
 ||||   | |||| ||| ||||  ||||  ||||||      ||||||  
 ucga   g gccu ugg ucag  cUGC  CUCAGG      UUGUCC u
c    auc c    g   g    --    -A      GCGUGG      u