Stem-loop ame-mir-3759

Accession

MI0016162

Description

Apis mellifera ame-mir-3759 precursor miRNA

Literature search

2 open access papers mention ame-mir-3759
(3 sentences)

Sequence

94237 reads, 2493.0 reads per million, 24 experiments

ggcuacucggaggcuAGUUAUGACGGAGGGUCUgagagcggggguuCCUGUUGGUGCGGGACUCACGUcgacuggguguccgcgcuaagcuc
((((.(.((((.(((((((..((((..((((((...((((((....))))))......)))))).)))))))).))).)))).)...)))).

Structure

-    --a u    g   -    AU    GA      ---gag      g 
 ggcu   c cgga gcu AGUU  GACG  GGGUCU      agcggg g
 ||||   | |||| ||| ||||  ||||  ||||||      ||||||  
 ucga   g gccu ugg ucag  cUGC  CUCAGG      UUGUCC u
c    auc c    g   g    --    -A      GCGUGG      u 

Annotation confidence Low

Genome context

GL630411.1: 1156-1247 [+]

Mature ame-miR-3759-5p

• Accession: MIMAT0053089
• Description: Apis mellifera ame-miR-3759-5p mature miRNA
• Sequence: 16 - AGUUAUGACGGAGGGUCU - 33
• Evidence: experimental ; SOLID [1], Illumina [2]

Mature ame-miR-3759-3p

• Accession: MIMAT0018532
• Description: Apis mellifera ame-miR-3759-3p mature miRNA
• Sequence: 47 - CCUGUUGGUGCGGGACUCACGU - 68
• Evidence: experimental ; SOLID [1], Illumina [2]

References

1. PubMed ID: 20807255
   Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
   "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
   "Insect Mol Biol (2010) 19:799-805


2. PubMed ID: 26853694
   MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
   "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
   "Insect Mol Biol (2016) 25:216-226