Stem-loop ame-mir-3760

Accession

MI0016163

Description

Apis mellifera ame-mir-3760 precursor miRNA

Sequence

aaauaaaaauuuguuuaauauuuucuuauucuuaAAUCAUAUGAAUAAUCAUUUCUAGaaaaauagagaaugucaagaaagauuauuuuucauucaaauuaugauauuauuuauaaauuagauaaauauuuaua
..(((((.(((((((((((......((((...((((((((((((((.....((((((......)))))).......((((((...)))))))))))...)))))).)))...))))))))))))))).))))).

Structure

aa     a           auuuuc    ucu   -      ---     -----------------AAUCA      Ga 
  auaaa auuuguuuaau      uuau   uaA AUCAUA   UGAAU                      UUUCUA  a
  ||||| |||||||||||      ||||   ||| ||||||   |||||                      ||||||   
  uauuu uaaauagauua      aaua   auu uaguau   acuua                      agagau  a
-a     a           ------    uuu   a      uaa     cuuuuuauuagaaagaacugua      aa 

Annotation confidence Low

Genome context

CM000069.5: 1227869-1228002 [+]

Mature ame-miR-3760-5p

• Accession: MIMAT0018533
• Description: Apis mellifera ame-miR-3760-5p mature miRNA
• Sequence: 35 - AAUCAUAUGAAUAAUCAUUUCUAG - 58
• Evidence: experimental ; SOLID [1], Illumina [2]

References

1. PubMed ID: 20807255
   Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
   "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
   "Insect Mol Biol (2010) 19:799-805


2. PubMed ID: 26853694
   MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
   "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
   "Insect Mol Biol (2016) 25:216-226