Stem-loop ame-mir-3770

Accession

MI0016175

Description

Apis mellifera ame-mir-3770 precursor miRNA

Literature search

1 open access papers mention ame-mir-3770
(3 sentences)

Sequence

2135 reads, 24.0 reads per million, 23 experiments

caacgcacauggacgcAAUCCUGCAUCAAGUGCGUUGUUuuguuuuucuauaaucagCAAUGCAUUGUAAGCAGGAUAGUguuaguguguuag
.(((((((...(((((.(((((((....(((((((((((((((......))))..)))))))))))....))))))).))))).)))))))..

Structure

-c       aug     A       AUCA           --    uu 
  aacgcac   gacgc AUCCUGC    AGUGCGUUGUU  uugu  u
  |||||||   ||||| |||||||    |||||||||||  ||||   
  uugugug   uugUG UAGGACG    UUACGUAACga  aaua  u
ga       --a     A       AAUG           cu    uc 

Annotation confidence Medium

Genome context

CM000054.5: 14555068-14555160 [-]

Mature ame-miR-3770-5p

• Accession: MIMAT0018545
• Description: Apis mellifera ame-miR-3770-5p mature miRNA
• Sequence: 17 - AAUCCUGCAUCAAGUGCGUUGUU - 39
• Evidence: experimental ; SOLID [1]

Mature ame-miR-3770-3p

• Accession: MIMAT0053092
• Description: Apis mellifera ame-miR-3770-3p mature miRNA
• Sequence: 58 - CAAUGCAUUGUAAGCAGGAUAGU - 80
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20807255
   Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
   "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
   "Insect Mol Biol (2010) 19:799-805