miRBase entry: ame-mir-3775

Stem-loop ame-mir-3775


Accession
MI0016182
Description
Apis mellifera ame-mir-3775 precursor miRNA


Sequence

aaucuuuuuuacuuuuGAGGCGGAUGAGGAGGUUGAAUAgaugaucgugguugcaaaaauuuguguacacguuauggguacaagcauugauuuuauauuucucucuacauaugugauuacuuguau
.........(((...(((.(((.(((.(((((..(((((...(((((..(((((((....))))((((.(......))))).)))..)))))...))))).))))).))).)))..)))...))).

Structure
aaucuuuuu   uuu   -G   G   A     UU     gau     ug   gcaaaaauuugu    a gu 
         uac   uGA  GCG AUG GGAGG  GAAUA   gaucg  guu            guac c  u
         |||   |||  ||| ||| |||||  |||||   |||||  |||            |||| |   
         aug   auu  ugu uac ucucu  uuuau   uuagu  cga            caug g  a
--------u   uuc   ag   a   a     -c     auu     ua   -----------a    - gu 


Annotation confidence Not enough data
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Genome context
CM000068.5: 6289657-6289782 [+]

Database links

Mature ame-miR-3775-5p

Accession MIMAT0018552
Description Apis mellifera ame-miR-3775-5p mature miRNA
Sequence 17 - GAGGCGGAUGAGGAGGUUGAAUA - 39
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805