Stem-loop ame-mir-3777

Accession

MI0016184

Description

Apis mellifera ame-mir-3777 precursor miRNA

Sequence

aaugaaaggucugcgaggaggaaagcucucuuuuauuaaacgaaaaauuggaucgcgcuugucggaaugcaauauuucgacggauucauuuggUGGAAACAUUUCUUCCCUGGGAaaaaauucaa
..((((...(((..(.((((((((......((((((((((........((((((.....((((((((((...))))))))))))))))))))))))))...)))))))))..))).....)))).

Structure

aa    --agg   gc a        gcucuc          cgaaaaau      gcgcu          c 
  ugaa     ucu  g ggaggaaa      uuuuauuaaa        uggauc     ugucggaaug  
  ||||     |||  | ||||||||      ||||||||||        ||||||     |||||||||| a
  acuu     AGG  C CCUUCUUU      AAGGUgguuu        acuuag     gcagcuuuau  
-a    aaaaa   GU -        ---ACA          --------      -----          a 

Annotation confidence Not enough data

Genome context

CM000067.5: 4309096-4309220 [+]

Mature ame-miR-3777-3p

• Accession: MIMAT0018554
• Description: Apis mellifera ame-miR-3777-3p mature miRNA
• Sequence: 94 - UGGAAACAUUUCUUCCCUGGGA - 115
• Evidence: experimental ; SOLID [1], Illumina [2]

References

1. PubMed ID: 20807255
   Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
   "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
   "Insect Mol Biol (2010) 19:799-805


2. PubMed ID: 26853694
   MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
   "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
   "Insect Mol Biol (2016) 25:216-226