miRBase entry: ame-mir-3778

Stem-loop ame-mir-3778


Accession
MI0016185
Description
Apis mellifera ame-mir-3778 precursor miRNA


Sequence

cuaugaaaggguacgauuauaaagauguugcgcuaauugaaugaauacuuguuacuuguggaccacgaaagaaagacgaguauuuGUAUAUAAUUGGAUGCUUUGUGCaaauuuuaa
...(((((..((((((.............((((((((((.(((((((((((((.(((.((.....)).)))...)))))))))))))...))))))).))).))))))...))))).

Structure
cua     -gg      uuauaaagauguu   -       --a             --a   g  g 
   ugaaa   guacga             gcg cuaauug   augaauacuuguu   cuu ug a
   |||||   ||||||             ||| |||||||   |||||||||||||   ||| || c
   auuuu   CGUGUU             CGU GGUUAAU   UGuuuaugagcag   gaa gc c
--a     aaa      ------------U   A       AUA             aaa   a  a 


Annotation confidence Not enough data
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Genome context
CM000067.5: 4229101-4229217 [+]

Database links

Mature ame-miR-3778-3p

Accession MIMAT0018555
Description Apis mellifera ame-miR-3778-3p mature miRNA
Sequence 86 - GUAUAUAAUUGGAUGCUUUGUGC - 108
Evidence experimental
SOLID [1], Illumina [2]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805

  2. PubMed ID: 26853694
    MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
    "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
    "Insect Mol Biol (2016) 25:216-226