miRBase entry: ame-mir-3787

Stem-loop ame-mir-3787


Accession
MI0016196
Description
Apis mellifera ame-mir-3787 precursor miRNA


Sequence

caucacgcguuauauagggaaucgauaaaacGAGUCGAGCUUGUGUGUGGAAacguucuaacaacauuguggaacaaaccagcgcgucaaaaauugcuucaauuuuguaaauaucgacagguuuuguaacccgugauu
.((((((.((((((.((....((((((..(((((..((((((((((((((....((((((.((....))))))))...))).)))).))).....))))....)))))...))))))....)).)))))).)))))).

Structure
c      c      u  ggaa      -aa     --UC    -----   -    -   AAac      a  a 
 aucacg guuaua ag    ucgaua   acGAG    GAGC     UUG UGUG UGG    guucua ca c
 |||||| |||||| ||    ||||||   |||||    ||||     ||| |||| |||    |||||| ||  
 uagugc caaugu uu    agcuau   uguuu    uucg     aac gcgc acc    caaggu gu a
u      c      u  ggac      aaa     uaac    uuaaa   u    g   -aaa      -  u 


Annotation confidence Not enough data
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Genome context
CM000065.5: 5148158-5148295 [-]

Database links

Mature ame-miR-3787-5p

Accession MIMAT0018566
Description Apis mellifera ame-miR-3787-5p mature miRNA
Sequence 32 - GAGUCGAGCUUGUGUGUGGAA - 52
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805