Stem-loop ame-mir-3789

Accession

MI0016198

Description

Apis mellifera ame-mir-3789 precursor miRNA

Sequence

ccgcucgaacucggcccucguuuggaccggcaacaaauuggccgccgcgcgcaugaugcugAUCUGGUGCUCGGUGAGGUGAGggggguacgcggggu
((((.((....))((((((.((...((((.(((....))).)(((((.((((..(((....)))..)))).))))).))))).))))))..))))...

Structure

---    ucgaacucg      g  ugg   ggcaacaaauuggc     c    au   g 
   ccgc         gcccuc uu   acc              cgccg gcgc  gau c
   ||||         |||||| ||   |||              ||||| ||||  |||  
   ggcg         uggggg AG   UGG              GUGGC CGUG  CUA u
ugg    -------ca      G  ---   -------------A     U    GU   g 

Annotation confidence Low

Genome context

CM000065.5: 9663654-9663751 [-]

Mature ame-miR-3789-3p

• Accession: MIMAT0018568
• Description: Apis mellifera ame-miR-3789-3p mature miRNA
• Sequence: 62 - AUCUGGUGCUCGGUGAGGUGAG - 83
• Evidence: experimental ; SOLID [1], Illumina [2]

References

1. PubMed ID: 20807255
   Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
   "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
   "Insect Mol Biol (2010) 19:799-805


2. PubMed ID: 26853694
   MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
   "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
   "Insect Mol Biol (2016) 25:216-226