Stem-loop ame-mir-3791

Accession

MI0016200

Description

Apis mellifera ame-mir-3791 precursor miRNA

Literature search

1 open access papers mention ame-mir-3791
(1 sentences)

Sequence

2928 reads, 43.0 reads per million, 24 experiments

aauauagagacugcugucgGAUGAAAUCUCGUCCGGUGUGGuuggaaaaaaaaaaccUCACCGGGUAGGAUUCAUCCAAuguccgccucuguu
...((((((.(.(.(((.(((((((.(((..(((((((.((((..........)))).)))))))..)))))))))).))).).).)))))).

Structure

aau      a u c   c       A   CG       U    ggaa 
   auagag c g ugu gGAUGAA UCU  UCCGGUG GGuu    a
   |||||| | | ||| ||||||| |||  ||||||| ||||     
   ugucuc g c guA CCUACUU AGG  GGGCCAC ccaa    a
--u      c c u   A       -   AU       U    aaaa 

Annotation confidence High

Genome context

CM000066.5: 1395544-1395636 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from ame-mir-3791

Mature ame-miR-3791-5p

• Accession: MIMAT0053096
• Description: Apis mellifera ame-miR-3791-5p mature miRNA
• Sequence: 20 - GAUGAAAUCUCGUCCGGUGUGG - 41
• Evidence: experimental ; SOLID [1]

Mature ame-miR-3791-3p

• Accession: MIMAT0018570
• Description: Apis mellifera ame-miR-3791-3p mature miRNA
• Sequence: 58 - UCACCGGGUAGGAUUCAUCCAA - 79
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20807255
   Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
   "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
   "Insect Mol Biol (2010) 19:799-805