miRBase entry: ame-mir-3791

Stem-loop ame-mir-3791


Accession
MI0016200
Description
Apis mellifera ame-mir-3791 precursor miRNA


Sequence

aauauagagacugcugucggaugaaaucucguccggugugguuggaaaaaaaaaaccUCACCGGGUAGGAUUCAUCCAauguccgccucuguu
...((((((.(.(.(((.(((((((.(((..(((((((.((((..........)))).)))))))..)))))))))).))).).).)))))).

Structure
aau      a u c   c       a   cg       u    ggaa 
   auagag c g ugu ggaugaa ucu  uccggug gguu    a
   |||||| | | ||| ||||||| |||  ||||||| ||||     
   ugucuc g c gua CCUACUU AGG  GGGCCAC ccaa    a
--u      c c u   A       -   AU       U    aaaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
CM000066.5: 1395544-1395636 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from ame-mir-3791
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ame-miR-3791-3p

Accession MIMAT0018570
Description Apis mellifera ame-miR-3791-3p mature miRNA
Sequence 58 - UCACCGGGUAGGAUUCAUCCA - 78
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805