miRBase entry: ame-mir-3792

Stem-loop ame-mir-3792


Accession
MI0016205
Description
Apis mellifera ame-mir-3792 precursor miRNA


Sequence

cggccucucguccgaguuacguguauuccguggagGACUGAGGAAAGAGAGAAGGAucggaaacgcaacgcaaccggauuccguuuucaucgauguucaacaguuuuaucucgcgaucgacauuucgaacuuggccu
.((((....((.((((....((((....((((((((((((..(((...((..((((.(((((.((.........))..)))))))))..))....)))..))))))..)).))))....)))))))).))..)))).

Structure
c    ucuc  c    uuac    auuc    -  --      AG   -AGA  GA    u     -a  caa 
 ggcc    gu cgag    gugu    cgug ga  gGACUG  GAA    GA  AGGA cggaa  cg   c
 ||||    || ||||    ||||    |||| ||  ||||||  |||    ||  |||| |||||  ||   g
 ccgg    ca gcuu    uaca    gcgc cu  uuugac  cuu    cu  uuuu gccuu  gc   c
u    --uu  a    ----    gcua    u  au      aa   guag  ac    -     ag  caa 


Annotation confidence Not enough data
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Genome context
CM000068.5: 10468168-10468304 [+]

Database links

Mature ame-miR-3792-5p

Accession MIMAT0018575
Description Apis mellifera ame-miR-3792-5p mature miRNA
Sequence 36 - GACUGAGGAAAGAGAGAAGGA - 56
Evidence experimental
SOLID [1], Illumina [2]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805

  2. PubMed ID: 26853694
    MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
    "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
    "Insect Mol Biol (2016) 25:216-226