miRBase entry: ame-mir-3796

Stem-loop ame-mir-3796


Accession
MI0016211
Description
Apis mellifera ame-mir-3796 precursor miRNA


Sequence

uccaucgugacgaauauucuucucucggggaugcgacucgagaguuaucggguaauuagcuuggguuucuuaugaguuugauucGAUCCUAAGGGGAGGAGAGGAUUUguaauugacguaucggu
.(((((((.((((((.((((((((((.(((((.(((((((.(((...((((((.....))))))....))).))))......))))))))...)))))))))).)))))....).))).)).)).

Structure
u  -  -   g ----     a          --g     g   ------    a   -uua      a 
 cc au cgu a    cgaau uucuucucuc   gggau cga      cucg gag    ucgggu a
 || || ||| |    ||||| ||||||||||   ||||| |||      |||| |||    |||||| u
 gg ua gca u    gUUUA GAGAGGAGGG   UCCUA Gcu      gagu uuc    gguucg u
u  c  u   g uaau     G          GAA     -   uaguuu    a   uuug      a 


Annotation confidence Not enough data
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Genome context
CM000069.5: 775446-775570 [+]

Database links

Mature ame-miR-3796-3p

Accession MIMAT0018581
Description Apis mellifera ame-miR-3796-3p mature miRNA
Sequence 85 - GAUCCUAAGGGGAGGAGAGGAUUU - 108
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805