Stem-loop ame-mir-3726

Accession

MI0016223

Description

Apis mellifera ame-mir-3726 precursor miRNA

Sequence

uggcgaaagauaaacaggccgaguggcacggccuuguccgcgAACGAGUGGUGGAUGCCAGCGUuuacauuccauuaaacguuggucuaucgccacucgaacagcaaccgucucauuugcccugugccg
.(((.........(((((.(((((((.((((..((((.......((((((((((..(((((((((((........)))))))))))...))))))))))....)))))))).))))))).)))))))).

Structure

u   gaaagauaa     c       c    cc    ccgcgAA          -AU           cau 
 ggc         acagg cgagugg acgg  uugu       CGAGUGGUGG   GCCAGCGUuua   u
 |||         ||||| ||||||| ||||  ||||       ||||||||||   |||||||||||    
 ccg         ugucc guuuacu ugcc  aacg       gcucaccgcu   ugguugcaaau   c
g   ---------     c       c    --    ---acaa          auc           uac 

Annotation confidence Low

Genome context

CM000060.5: 11022608-11022736 [-]

Mature ame-miR-3726-5p

• Accession: MIMAT0018593
• Description: Apis mellifera ame-miR-3726-5p mature miRNA
• Sequence: 43 - AACGAGUGGUGGAUGCCAGCGU - 64
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20807255
   Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
   "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
   "Insect Mol Biol (2010) 19:799-805