Stem-loop ame-mir-3732

Accession

MI0016230

Description

Apis mellifera ame-mir-3732 precursor miRNA

Sequence

3781 reads, 67.0 reads per million, 24 experiments

aaucgucggagcaucauuguguguguuuguaugcuuuacuacuuucuaucaAAUUGUCUGGGUUUCUCCUuacccuuucagugaaaguugggaaaugcguuugGCGACGCCAUGUUUGGUCUCAUCUUuugaua
.((((...(((.((((.((((.(((((.((((((((..((((((((......((((...((((........))))...))))))))).)))..)).))))...)))))))))))..)))))))......)))).

Structure

a    ---ucg   c    -u    u     u  ---    -  ua   -     uaucaA    UCU    UUC 
 aucg      gag auca  ugug guguu gu   augc uu  cua cuuuc      AUUG   GGGU   U
 ||||      ||| ||||  |||| ||||| ||   |||| ||  ||| |||||      ||||   ||||    
 uagu      CUC UGGU  GUAC CGCAG CG   ugcg aa  ggu gaaag      ugac   ccca   C
a    uUUCUA   -    UU    -     -  guu    u  ag   u     ------    uuu    uUC 

Annotation confidence Low

Genome context

CM000058.5: 13513238-13513371 [-]

Mature ame-miR-3732-5p

• Accession: MIMAT0053106
• Description: Apis mellifera ame-miR-3732-5p mature miRNA
• Sequence: 52 - AAUUGUCUGGGUUUCUCCU - 70
• Evidence: experimental ; SOLID [1]

Mature ame-miR-3732-3p

• Accession: MIMAT0018600
• Description: Apis mellifera ame-miR-3732-3p mature miRNA
• Sequence: 104 - GCGACGCCAUGUUUGGUCUCAUCUU - 128
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20807255
   Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
   "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
   "Insect Mol Biol (2010) 19:799-805