Stem-loop ame-mir-3736

Accession

MI0016235

Description

Apis mellifera ame-mir-3736 precursor miRNA

Literature search

1 open access papers mention ame-mir-3736
(1 sentences)

Sequence

cgagaucugcguccucggCGAUUACCCUGAGUAUGCUCCgaugcauaggcguguccuccgcgacgguggccucguacuuggucggguagaagaggggguucaggucg
...(((((((.(((((.....(((((((((((((((((((.(((..(((.....)))..))).))).)))...)))))))...))))))..))))).)..)))))).

Structure

cga      -- g     ggCGA      ---       ---   -   a   au   c 
   gaucug  c uccuc     UUACCC   UGAGUAU   GCU CCg ugc  agg g
   ||||||  | |||||     ||||||   |||||||   ||| ||| |||  ||| u
   cuggac  g gggag     gauggg   guucaug   cgg ggc gcg  ucc g
--g      uu g     ---aa      cug       cuc   u   a   cc   u 

Annotation confidence Not enough data

Genome context

CM000056.5: 11979270-11979376 [-]

Mature ame-miR-3736-5p

• Accession: MIMAT0018605
• Description: Apis mellifera ame-miR-3736-5p mature miRNA
• Sequence: 19 - CGAUUACCCUGAGUAUGCUCC - 39
• Evidence: experimental ; SOLID [1], Illumina [2]

References

1. PubMed ID: 20807255
   Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
   "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
   "Insect Mol Biol (2010) 19:799-805


2. PubMed ID: 26853694
   MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
   "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
   "Insect Mol Biol (2016) 25:216-226