miRBase entry: ame-mir-3744

Stem-loop ame-mir-3744


Accession
MI0016243
Description
Apis mellifera ame-mir-3744 precursor miRNA


Sequence

gaguauuaaaguugaCGGUAUCUUUGUGAAAAAUUUCGagaagagggaauuuugaauuuaaaucguuucuaucuauguuccucuuguuagaaauuaagaauaaaauacugucuucaucaacuuuguuccaucucc
(((...(((((((((((((((.(((((....((((((((.((((((((.....(((..........)))........)))))))).)).))))))....)))))))))))))......)))))))......))).

Structure
-   ---uau       ------        C     GAAA      -  g        ---auuuu   uuua 
 gag      uaaaguu      gaCGGUAU UUUGU    AAUUUC Ga aagaggga        gaa    a
 |||      |||||||      |||||||| |||||    |||||| || ||||||||        |||     
 cuc      guuucaa      cugucaua aaaua    uuaaag uu uucuccuu        cuu    a
c   uaccuu       cuacuu        -     agaa      a  g        guaucuau   ugcu 


Annotation confidence Not enough data
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Genome context
CM000061.5: 5438403-5438537 [+]

Database links

Mature ame-miR-3744-5p

Accession MIMAT0018613
Description Apis mellifera ame-miR-3744-5p mature miRNA
Sequence 16 - CGGUAUCUUUGUGAAAAAUUUCG - 38
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805