Stem-loop ame-mir-3744

Accession

MI0016243

Description

Apis mellifera ame-mir-3744 precursor miRNA

Sequence

gaguauuaaaguugaCGGUAUCUUUGUGAAAAAUUUCGagaagagggaauuuugaauuuaaaucguuucuaucuauguuccucuuguuagaaauuaagaauaaaauacugucuucaucaacuuuguuccaucucc
(((...(((((((((((((((.(((((....((((((((.((((((((.....(((..........)))........)))))))).)).))))))....)))))))))))))......)))))))......))).

Structure

-   ---uau       ------        C     GAAA      -  g        ---auuuu   uuua 
 gag      uaaaguu      gaCGGUAU UUUGU    AAUUUC Ga aagaggga        gaa    a
 |||      |||||||      |||||||| |||||    |||||| || ||||||||        |||     
 cuc      guuucaa      cugucaua aaaua    uuaaag uu uucuccuu        cuu    a
c   uaccuu       cuacuu        -     agaa      a  g        guaucuau   ugcu 

Annotation confidence Low

Genome context

CM000061.5: 5438403-5438537 [+]

Mature ame-miR-3744-5p

• Accession: MIMAT0018613
• Description: Apis mellifera ame-miR-3744-5p mature miRNA
• Sequence: 16 - CGGUAUCUUUGUGAAAAAUUUCG - 38
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20807255
   Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
   "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
   "Insect Mol Biol (2010) 19:799-805