miRBase entry: ame-mir-750

Stem-loop ame-mir-750


Accession
MI0016245
Description
Apis mellifera ame-mir-750 precursor miRNA

Literature search
1 open access papers mention ame-mir-750
(1 sentences)

Sequence

gggcguugcauggacugugaucugcaugacuugcaguuggaagugaggaucuaggcagugagcagcagcgcucugauaacuugCCAGAUCUAACUCUUCCAGCUCaaggucuuguugauuaucaucucccaaacga
...((((....(((..((((((.(((.(((((..(((((((((.(.((((((.((((((((((......)))).....)).))))))))))..).)))))))))..))))).))).))))))..)))....)))).

Structure
ggg    gcau   cu      u   u     gc         u -a      a    -  -----    ag 
   cguu    gga  gugauc gca gacuu  aguuggaag g  ggaucu ggca gu     gagc  c
   ||||    |||  |||||| ||| |||||  ||||||||| |  |||||| |||| ||     ||||   
   gcaa    ucu  uauuag ugu cugga  UCGACCUUC C  UCUAGA CCgu ca     cucg  a
--a    accc   ac      u   u     aC         U AA      -    u  auagu    cg 


Annotation confidence Not enough data
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Genome context
GL631151.1: 1934-2069 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ame-mir-750
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ame-miR-750-3p

Accession MIMAT0018615
Description Apis mellifera ame-miR-750-3p mature miRNA
Sequence 84 - CCAGAUCUAACUCUUCCAGCUC - 105
Evidence experimental
SOLiD [1], Illumina [2]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805

  2. PubMed ID: 26853694
    MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
    "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
    "Insect Mol Biol (2016) 25:216-226