Stem-loop tca-mir-3833

Accession

MI0016295

Description

Tribolium castaneum tca-mir-3833 precursor miRNA

Sequence

uuuuguuaguuuuaaCGGCAAGUCACAGCAGGCUguuauggaaaucACAGUAACAGCCUUCCUGAAGCUUGCaagagaaaauugaacugu
.....((((((((....((((((..(((.((((((((((.(......).))))))))))..)))..)))))).....)))))))).....

Structure

uuuug        -aaCG      CA   -C          g aa 
     uuaguuuu     GCAAGU  CAG  AGGCUguuau g  a
     ||||||||     ||||||  |||  |||||||||| |   
     aguuaaaa     CGUUCG  GUC  UCCGACAAUG C  u
uguca        gagaa      AA   CU          A Ac 

Annotation confidence Not enough data

Genome context

ChLG2: 3458975-3459064 [+]

Mature tca-miR-3833-5p

• Accession: MIMAT0018696
• Description: Tribolium castaneum tca-miR-3833-5p mature miRNA
• Sequence: 16 - CGGCAAGUCACAGCAGGCU - 34
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3833-3p

• Accession: MIMAT0018697
• Description: Tribolium castaneum tca-miR-3833-3p mature miRNA
• Sequence: 47 - ACAGUAACAGCCUUCCUGAAGCUUGC - 72
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696