Stem-loop tca-mir-3835

Accession

MI0016298

Description

Tribolium castaneum tca-mir-3835 precursor miRNA

Sequence

uaaaaucuuguUGCCACUGAUGAAUUACUGCUAGAAUcuuccuuuaauuuaagUUGAGGAUUCGCAGUUUCUGAGGCAAauuagaaaa
.....(((..(((((......(((..(((((..(((((((((((......)))..))))))))))))))))...)))))...)))...

Structure

uaaaa   -ug     ACUGAU   UU     UA        --   ua 
     ucu   uUGCC      GAA  ACUGC  GAAUcuuc  cuu  a
     |||   |||||      |||  |||||  ||||||||  |||   
     aga   AACGG      CUU  UGACG  CUUAGGAG  gaa  u
--aaa   uua     ---AGU   --     --        UU   uu 

Annotation confidence Not enough data

Genome context

ChLG2: 2187947-2188034 [+]

Mature tca-miR-3835-5p

• Accession: MIMAT0018702
• Description: Tribolium castaneum tca-miR-3835-5p mature miRNA
• Sequence: 12 - UGCCACUGAUGAAUUACUGCUAGAAU - 37
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3835-3p

• Accession: MIMAT0018703
• Description: Tribolium castaneum tca-miR-3835-3p mature miRNA
• Sequence: 54 - UUGAGGAUUCGCAGUUUCUGAGGCAA - 79
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696