miRBase entry: tca-mir-3880

Dead hairpin entry

Stem-loop tca-mir-3880


Accession
MI0016376
Description
Tribolium castaneum tca-mir-3880 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

7432 reads, 663.0 reads per million, 34 experiments
cuucauuggguccaagaaacgaaagaauucggcgauUUUUGUCCUCUGAGUCUUAGGUUCCGGgaauugagauUGCGACUUCCGUCGAUGUUGUCCugaaauac
.....(((((..(((.(..(((..(((.(((.(((((((.((.(((.(((.(....)))).))).)).)))))))))).)))..))).).))).))))).....

Structure
cuuca     uc   g aa   aa   u   g       U  C   U   U U 
     uuggg  caa a  cga  gaa ucg cgauUUU GU CUC GAG C U
     |||||  ||| |  |||  ||| ||| ||||||| || ||| ||| |  
     aguCC  GUU U  GCU  CUU AGC GUuagag ua gGG CUU G A
cauaa     -U   G -A   GC   C   -       u  a   C   - G