Stem-loop tca-mir-3884

Accession

MI0016381

Description

Tribolium castaneum tca-mir-3884 precursor miRNA

Sequence

4419 reads, 288.0 reads per million, 33 experiments

aaaacugaagcugacgaguUAACUGCCGGGUACUUGUUcccggauuuuUUCCCCAGCCUCAAGAAG
.....(((.((((..(((.......(((((........))))).....)))..)))).))).....

Structure

aaaac   a    ac   uUAACUG     UAC 
     uga gcug  gag       CCGGG   U
     ||| ||||  |||       |||||    
     ACU CGAC  CUU       ggccc   U
GAAGA   C    CC   --uuuua     UUG 

Annotation confidence Low

Genome context

ref|NW_015451001.1|: 1844-1909 [+]

Mature tca-miR-3884-5p

• Accession: MIMAT0018866
• Description: Tribolium castaneum tca-miR-3884-5p mature miRNA
• Sequence: 20 - UAACUGCCGGGUACUUGUU - 38
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3884-3p

• Accession: MIMAT0018867
• Description: Tribolium castaneum tca-miR-3884-3p mature miRNA
• Sequence: 49 - UUCCCCAGCCUCAAGAAG - 66
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696